WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00112386 Genotype  GFP::SP12 (hjIs14)
Phenotype Remark  In atln-1 RNAi-treated animals the Endoplasmic Reticulum is depleted from the lateral regions of cells. Remark  Exact sequence used for RNAi not stated by authors, the spliced coding region Y54G2A.2a used for curation.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021868 atln-1 Y54G2A.2 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y54G2A.2b Y54G2A.2b 1608   IV: 2788701-2788898
CDS:Y54G2A.2a Y54G2A.2a 1722   IV: 2788701-2788898
CDS:Y54G2A.2c Y54G2A.2c 885   IV: 2793429-2793486
CDS:Y54G2A.2d Y54G2A.2d 357   IV: 2795708-2795893

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0001880 endoplasmic reticulum morphology variant Any variation in the form, structure or composition of the endoplasmic reticulum compared to control. The endoplasmic reticulum (ER) is an irregular network of membranes, that occurs in the cytoplasm, and forms a complex meshwork of tubular channels. The ER has two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached).

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00042415

0 Strain