WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00097824 Genotype  Plim-7::YFP::ACT-5
Phenotype Remark  ced-1 RNAi resulted in fewer germ cells exhibiting a YFP::Actin halo, indicative of a defect in the initial phases of phagosome maturation Remark  (Figure S2d) ced-1 RNAi. Exact sequence used for RNAi not stated by authors, Ahringer laboratory clone used for curation.
Paste the following link
Lists
This RNAi isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000415 ced-1 Y47H9C.4 Caenorhabditis elegans

3 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y47H9C.4a Y47H9C.4a 3336   I: 11851953-11852041
CDS:Y47H9C.4c Y47H9C.4c 3138   I: 11851953-11852041
CDS:Y47H9C.4b Y47H9C.4b 3213   I: 11851953-11852041

0 Laboratories

2 Phenotype

Identifier Name Description
WBPhenotype:0000243 engulfment failure by killer cell Removal of cell corpses through a dedicated engulfment pathway is defective.
WBPhenotype:0001846 phagosome maturation defective Early phagosomes fail to undergo the maturation process following the ingestion of particulate material by phagocytosis; During maturation, phagosomes acquire markers of late endosomes and lysosomes.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00036059

0 Strain