WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00110872 Genotype  frIs7[Pnlp-29::GFP]
Phenotype Remark  RNAi resulted in a reduction in expression of the anitmicrobial peptide gene nlp-29 in worms after infection by Drechmeria coniospora, as indicated by reduced expression of a Pnlp-29::GFP transgene, compared to controls Remark  Table S5, sheet "final 297 clones", column "Is clone/overlaps clone"
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

5 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000975 dhs-12 K08F4.9 Caenorhabditis elegans
WBGene00003434 msp-38 K08F4.8 Caenorhabditis elegans
WBGene00003465 msp-78 T13F2.11 Caenorhabditis elegans
WBGene00003467 msp-81 K07F5.1 Caenorhabditis elegans
WBGene00003449 msp-56 K07F5.3 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K07F5.3 K07F5.3 384   IV: 9841540-9841923
CDS:K07F5.1 K07F5.1 384   IV: 9836034-9836417
CDS:K08F4.8 K08F4.8 384   IV: 10143357-10143740
CDS:T13F2.11 T13F2.11 384   IV: 9770046-9770429

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0002460 no induction of antimicrobial peptide expression after infection Animals exhibit no induction of expression of an antimicrobial peptide after an infection, unlike control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00049531

0 Strain