WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00092857 Genotype  PS4730 [syIs128[unc-119(+)(100 g/ml) + lag-2::YFP(50 g/ml)]II; unc-119(ed4)III; him-5(e1490)V]
Remark  (Table S8, S9) msp-19 RNAi
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

11 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003450 msp-57 R13H9.2 Caenorhabditis elegans
WBGene00018122 ttbk-2.1 F36H12.8 Caenorhabditis elegans
WBGene00020071 ttbk-2.2 R13H9.5 Caenorhabditis elegans
WBGene00022002 Y59E9AR.7 Y59E9AR.7 Caenorhabditis elegans
WBGene00003448 msp-55 C09B9.6 Caenorhabditis elegans
WBGene00003446 msp-53 R13H9.4 Caenorhabditis elegans
WBGene00021997 Y59E9AR.1 Y59E9AR.1 Caenorhabditis elegans
WBGene00003426 msp-19 F36H12.7 Caenorhabditis elegans
WBGene00003444 msp-51 ZK354.5 Caenorhabditis elegans
WBGene00003468 msp-113 ZK354.4 Caenorhabditis elegans
WBGene00003452 msp-59 ZK354.11 Caenorhabditis elegans

11 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R13H9.4 R13H9.4 384   IV: 5064678-5065061
CDS:R13H9.5 R13H9.5 936   IV: 5065752-5065841
CDS:Y59E9AR.7 Y59E9AR.7 393   IV: 5241402-5241794
CDS:Y59E9AR.1 Y59E9AR.1 393   IV: 5249428-5249820
CDS:ZK354.5 ZK354.5 384   IV: 5294957-5295340
CDS:ZK354.4 ZK354.4 384   IV: 5297962-5298345
CDS:ZK354.11 ZK354.11 384   IV: 5312728-5313111
CDS:C09B9.6 C09B9.6 384   IV: 5055631-5056014
CDS:F36H12.7 F36H12.7 384   IV: 5260589-5260972
CDS:F36H12.8 F36H12.8 936   IV: 5258756-5258803
CDS:R13H9.2 R13H9.2 384   IV: 5062578-5062961

1 Laboratories

Primary Identifier
PS

1 Phenotype

Identifier Name Description
WBPhenotype:0001511 linker cell migration variant Variations in the stereotypical migration pattern of the linker cell in a developing male compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00041549

0 Strain