WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00110262 Phenotype Remark  "To understand the role of lin-65 and met-2 in regulating the transcriptional response to mitochondrial stress, we performed RNA sequencing (RNA-seq) on wild-type, lin-65, and met-2 animals, each in the presence or absence of cco-1 RNAi. In wildtype animals, our analysis identified 1,312 genes that were differentially expressed in the cco-1 RNAi-treated condition relative to animals grown on empty vector bacteria (Benjamini adjusted p value < 0.05) (Figures 5A and S6A; Table S2)."
Remark  (Figures 5A and S6A; Table S2) cco-1 RNAi. RNAi strains were from the Vidal library if present, or the Ahringer library if absent from the Vidal library.
Paste the following link
Lists
This RNAi isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000371 cox-5B F26E4.9 Caenorhabditis elegans
WBGene00045369 F26E4.14 F26E4.14 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F26E4.9 F26E4.9 399   I: 9789009-9789194

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0000114 mRNA expression variant Variations in the biogenesis and stability of messenger RNA molecules compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00050412

0 Strain