WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00078079 Genotype  cgt-1(qa1809);cgt-2(tm1192)
Phenotype Remark  Glucosylceramide (GlcCer) levels reduction is enhanced by cgt-2. GlcCer levels were further reduced when all three cgt genes were knocked down suggesting that cgt-2 encodes a functional CGT protein. The level of GlcCer was 7.51.3 percent of wild type in this background compared to 243 percent of wild type when RNAi of cgt-3 was done in the cgt-1(qa1809) background.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019127 cgt-3 F59G1.1 Caenorhabditis elegans

3 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F59G1.1b F59G1.1b 1413   II: 5912604-5912667
CDS:F59G1.1a F59G1.1a 1380   II: 5914226-5914256
CDS:F59G1.1d F59G1.1d 1179   II: 5915224-5915321

1 Laboratories

Primary Identifier
LZ

1 Phenotype

Identifier Name Description
WBPhenotype:0000027 organism metabolism processing variant Variations in the chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances compared to control.

1 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000183 apoptosis increased Any perturbation that causes an elevation in the frequency of cell death by apoptosis compared to control animals.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00032934

0 Strain