WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00086357 Genotype  rrf-3(pk1426)
Phenotype Remark  Authors report that sop-3 and sop-1 RNAi combine to generate a synthetic lethal phenotype
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001081 dpy-22 F47A4.2 Caenorhabditis elegans
WBGene00004946 sop-3 Y71F9B.10 Caenorhabditis elegans

5 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F47A4.2 F47A4.2 10497   X: 9810469-9810562
CDS:Y71F9B.10a Y71F9B.10a 4428   I: 2761318-2761513
CDS:Y71F9B.10b Y71F9B.10b 4134   I: 2761318-2761513
CDS:Y71F9B.10c Y71F9B.10c 4446   I: 2761318-2761513
CDS:Y71F9B.10g Y71F9B.10g 4152   I: 2761318-2761513

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00028381

0 Strain