WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00065156 Genotype  pha-4(zu225)
Phenotype Remark  Enhancement of pha-4(zu225) L1 lethality and RNAi in this background causes a pharynx unattached (pun) phenotype. Remark  pha-4(zu225) is a temperature sensitive allele and 24 C is a permissive temperature. The enhancement of pha-4 lethality was shown to have some specificity as no enhancement was seen in either the hsf-1(sy441), tbx-2(ut180) or lin-26(n156) backgrounds. In addiition this RNAi did not enhance the movement defect in the unc-54(r293ts) allele. Like pha-4(zu225), RNA derived from unc-54(r293) is subject to degradation by the nonsense-mediated decay pathway.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007029 mys-1 VC5.4 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:VC5.4 VC5.4 1377   V: 7081758-7081775

1 Laboratories

Primary Identifier
SM

2 Phenotype

Identifier Name Description
WBPhenotype:0001748 pharynx unattached The pharynx or pharyngeal muscle does not form a functional connection to the mouth or buccal cavity.
WBPhenotype:0000062 lethal Animals die prematurely at any stage of the life cycle.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00028549

0 Strain