WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00059917 Phenotype Remark  Upon growing on plates containing 20 mM EGTA, the survival rate of pmr-1 RNAi-treated worms decreased up to 23% compared to control gfp RNAi treated worms (N2, 4.4 +- 0.3 days; gfp RNAi, 4.3 +- 0.2 days; pmr-1 RNAi, 3.3 +- 0.3 days). The survival rate of pmr-1 RNAi worms decreased up to 32% when grown on plates with 20 mM MnCl2 (N2: 4.5 +- 0.3 days, gfp RNAi: 4.4 +- 0.5 days, pmr-1 RNAi: 3.0 +- 0.3 days). However, pmr-1 RNAi-treated worms showed dramatically increased paraquat resistance (survival rate increased up to 39%) compared to gfp RNAi treated animals.
Remark  Entire sequence of clone used for RNAi not known as only the ends of the sequence were determined. The only target shown is the best match.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004063 pmr-1 ZK256.1 Caenorhabditis elegans

3 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK256.1a ZK256.1a 2706   I: 13012220-13012531
CDS:ZK256.1b ZK256.1b 2118   I: 13012220-13012531
CDS:ZK256.1c ZK256.1c 2937   I: 13011462-13011500

1 Laboratories

Primary Identifier
KJ

1 Phenotype

Identifier Name Description
WBPhenotype:0000067 organism stress response variant Animals exhibit variations in response to stress stimuli compared to control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00024915

1 Strain

WormBase ID
WBStrain00000001