WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00092023 Genotype  rrf-3(pk1426); daf-2(m577); wuIs177 (Pftn-1::GFP)
Phenotype Remark  RNAi resulted in decreased expression of the Pftn-1::GFP transgene Remark  (Table S1) lir-1 RNAi
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003044 lir-1 F18A1.3 Caenorhabditis elegans

14 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F18A1.3a F18A1.3a 891   II: 7672043-7672108
CDS:F18A1.3d F18A1.3d 903   II: 7672043-7672108
CDS:F18A1.3l F18A1.3l 921   II: 7672043-7672108
CDS:F18A1.3f F18A1.3f 711   II: 7681165-7681326
CDS:F18A1.3j F18A1.3j 714   II: 7681165-7681326
CDS:F18A1.3e F18A1.3e 750   II: 7681165-7681326
CDS:F18A1.3g F18A1.3g 426   II: 7681609-7681895
CDS:F18A1.3n F18A1.3n 456   II: 7681609-7681895
CDS:F18A1.3b F18A1.3b 930   II: 7672043-7672108
CDS:F18A1.3c F18A1.3c 756   II: 7672043-7672108
CDS:F18A1.3h F18A1.3h 465   II: 7681609-7681895
CDS:F18A1.3i F18A1.3i 894   II: 7672043-7672108
CDS:F18A1.3k F18A1.3k 429   II: 7681609-7681895
CDS:F18A1.3m F18A1.3m 741   II: 7681165-7681326

1 Laboratories

Primary Identifier
GA

1 Phenotype

Identifier Name Description
WBPhenotype:0001278 transgene expression reduced Any decrease in the intensity of expression of a gene product produced by exogenous DNA that has been introduced into the organism compared to its expression in control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00040863

0 Strain