WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00077228 Genotype  ppgp-5::gfp
Phenotype Remark  Although there was significantly reduced survival on P. aeruginosa strain PA14, compared to control animals, this tir-1 isoform did not significantly affect the induction of pgp-5 in response to infection. The pan-isoform tir-1 RNAi affected both expression and reduced survival. Remark  The ppgp-5::gfp reporter strain contains an integrated transgene, ppgp-5::gfp, in which the GFP-encoding gene is under the control of the 300 bp upstream sequence of the pgp-5 promoter.
Paste the following link
Lists
This RNAi isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006575 tir-1 F13B10.1 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F13B10.1b F13B10.1b 1761   III: 3870183-3870268

1 Laboratories

Primary Identifier
WE

1 Phenotype

Identifier Name Description
WBPhenotype:0001271 pathogen induced death increased Animals are more prone to lethality as a result of infection compared to control.

1 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000962 level of transgene expression variant Any variation in the measured expression of a gene product produced by exogenous DNA that has been introduced into the organism compared to its expression in control animals.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00031023

0 Strain