WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00093139 Genotype  Phsp-4::GFP
Phenotype Remark  rrt-1(RNAi) completely blocked hypoxic induction of Phsp-4::GFP however, it did not diminish induction by tunicamycin. Remark  Phsp-4::GFP consists of a fusion between the hsp-4 promoter and GFP. Phsp-4::GFP expression has been shown to be a reliable indicator of the level of unfolded proteins and of activation of the UPR.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004679 rars-1 F26F4.10 Caenorhabditis elegans

2 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F26F4.10a F26F4.10a 2142   III: 4914257-4914363
CDS:F26F4.10b F26F4.10b 2079   III: 4914324-4914363

1 Laboratories

Primary Identifier
MC

1 Phenotype

Identifier Name Description
WBPhenotype:0000306 transgene expression variant Any variation in the characteristic expression of a gene product produced by exogenous DNA that has been introduced into the organism compared to control animals.

1 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000359 tunicamycin response variant Animals exhibit variations in the response to the addition of tunicamycin compared to that observed in control animals. Tunicamycin induces the unfolded protein response.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00032521

0 Strain