WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00088421 Phenotype Remark  The triple RNAi [coh-1(RNAi); scc-1/coh-2(RNAi); coh-3(RNAi)] caused essentially the same embryonic phenotypes as scc-1/coh-2(RNAi).
Remark  paper remark: Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation. Authors used yk226d1 (coh-1), yk72e8 (coh-3) and yk256h5(scc-1/coh-2).
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

3 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000591 coh-1 K08A8.3 Caenorhabditis elegans
WBGene00000592 coh-3 F08H9.1 Caenorhabditis elegans
WBGene00004737 scc-1 F10G7.4 Caenorhabditis elegans

6 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F10G7.4 F10G7.4 1938   II: 4698721-4698972
CDS:F08H9.1 F08H9.1 1824   V: 14457475-14457536
CDS:K08A8.3c K08A8.3c 414   X: 7466321-7466491
CDS:K08A8.3b K08A8.3b 495   X: 7466321-7466491
CDS:K08A8.3a K08A8.3a 1794   X: 7466321-7466491
CDS:K08A8.3d K08A8.3d 156   X: 7466321-7466476

1 Laboratories

Primary Identifier
YM

2 Phenotype

Identifier Name Description
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.
WBPhenotype:0000773 chromosome segregation variant Any variation in the processes that regulate the apportionment of chromosomes to each of two daughter cells compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00005937

1 Strain

WormBase ID
WBStrain00000001