WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00077775 Remark  Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation. Authors amplified by PCR from a C. elegans mixed stage cDNA library. Primer sequences are available from the author on request.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004466 rpn-10 B0205.3 Caenorhabditis elegans
WBGene00006734 ufd-2 T05H10.5 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0205.3 B0205.3 1041   I: 10730928-10731299
CDS:T05H10.5c T05H10.5c 2940   II: 8062752-8062808
CDS:T05H10.5a T05H10.5a 2943   II: 8062752-8062808
CDS:T05H10.5b T05H10.5b 2955   II: 8062752-8062808

0 Laboratories

0 Phenotype

1 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000727 enzyme activity variant Any variation in the function of naturally occurring macromolecular substances known as enzymes compared to control. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein (can include an RNA component).

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00028730

1 Strain

WormBase ID
WBStrain00000001