WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00098368 Phenotype Remark  The defecation motor program of the abtm-1(RNAi) worms is disrupted. Although the mean period is only slightly increased, the rhythmicity of the cycle, as measured by the coefficient of variation (CV) is substantially disrupted. Moreover, as well as having disrupted defecation cycles, abtm-1(RNAi) worms are also constipated (data not shown), which suggests that the worms also have a defect in the final expulsion (Exp) step.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022281 abtm-1 Y74C10AR.3 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y74C10AR.3a Y74C10AR.3a 2115   I: 2472418-2472504

1 Laboratories

Primary Identifier
RVM

2 Phenotype

Identifier Name Description
WBPhenotype:0000207 defecation cycle variant Any variation in the stereotyped sequence of muscle contractions that result in defecation over a fixed time period compared to control .
WBPhenotype:0000651 constipated Animals exhibit delayed or infrequent passage and/or expulsion of fecal matter.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00038292

0 Strain