WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00090901 Genotype  unc-119(ed3) III; cbgIs91[pPept-1:pept-1::DsRed;unc-119(+)]; cbgIs98[pPept-1:GFP::rab-11.1;unc-119(+)]
Phenotype Remark  PEPT-1::DsRED accumulated in fuzzy or irregularly shaped structures; Autofluorescent lysosome-related organelles (AF/LROs) are enlarged or accumulated Remark  (Table S1) W07A8.3/dnj-25 RNAi
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001043 dnj-25 W07A8.3 Caenorhabditis elegans
WBGene00012321 srxa-6 W07A8.5 Caenorhabditis elegans

5 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W07A8.3a W07A8.3a 2355   V: 20730269-20730412
CDS:W07A8.3d W07A8.3d 2361   V: 20730269-20730412
CDS:W07A8.3b W07A8.3b 1377   V: 20730269-20730412
CDS:W07A8.3c W07A8.3c 1326   V: 20730269-20730412
CDS:W07A8.5 W07A8.5 987   V: 20734983-20735217

1 Laboratories

Primary Identifier
MZE

2 Phenotype

Identifier Name Description
WBPhenotype:0000679 transgene subcellular localization variant Any variation in the subcellular localization of a gene product produced by DNA coded for by exogenous genetic material that has been introduced into the organism compared to its expression in control animals.
WBPhenotype:0002095 lysosome-related organelle morphology variant Any variation in the form or composition of membrane bound organelles, known as lysosome-related organelles (LROs) that, like lysosomes, have an acidic interior and generally act to digest components of the cell but are distinct in function, composition, and morphology, compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00041129

0 Strain