WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00097861 Genotype  Pced-1::CCZ-1::YFP
Phenotype Remark  vps-11 RNAi resulted in visible fluorescent halos of CCZ-1::YFP in phagosomes engulfing apoptotic cell corpses (as in wild type), albeit to a lesser extent than wild type. The presence of the CCZ-1::YFP halos suggests that CCZ-1 acts upstream of VPS-11 in the phagosome maturation pathway. Remark  (Figure 3B, 3C) vps-11 RNAi. Exact sequence used for RNAi not stated by authors, Ahringer laboratory clone used for curation.
Paste the following link
Lists
This RNAi isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011067 vps-11 R06F6.2 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R06F6.2 R06F6.2 2943   II: 10788405-10788668

1 Laboratories

Primary Identifier
JCP

2 Phenotype

Identifier Name Description
WBPhenotype:0000679 transgene subcellular localization variant Any variation in the subcellular localization of a gene product produced by DNA coded for by exogenous genetic material that has been introduced into the organism compared to its expression in control animals.
WBPhenotype:0001846 phagosome maturation defective Early phagosomes fail to undergo the maturation process following the ingestion of particulate material by phagocytosis; During maturation, phagosomes acquire markers of late endosomes and lysosomes.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00036342

0 Strain