WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00064589 Remark  Genetic enhancer interactions are identified by comparing RNAi phenotypes of library genes in wild-type animals with those seen in mutant worms carrying a defined lesion in a single query gene; a genetic interaction between a query gene and a library gene is observed if the phenotype of the combined perturbation is greater than the sum of the two individual perturbations.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004946 sop-3 Y71F9B.10 Caenorhabditis elegans

7 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y71F9B.10f Y71F9B.10f 423   I: 2761318-2761513
CDS:Y71F9B.10e Y71F9B.10e 3498   I: 2761318-2761513
CDS:Y71F9B.10a Y71F9B.10a 4428   I: 2761318-2761513
CDS:Y71F9B.10b Y71F9B.10b 4134   I: 2761318-2761513
CDS:Y71F9B.10c Y71F9B.10c 4446   I: 2761318-2761513
CDS:Y71F9B.10d Y71F9B.10d 3480   I: 2761318-2761513
CDS:Y71F9B.10g Y71F9B.10g 4152   I: 2761318-2761513

1 Laboratories

Primary Identifier
ANF

3 Phenotype

Identifier Name Description
WBPhenotype:0000031 slow growth Any variation that causes a reduction in growth rate compared to control.
WBPhenotype:0000054 larval lethal The animal dies at any time between hatching and onset to adulthood.
WBPhenotype:0000535 organism morphology variant Animals exhibit variations in the form, structure or composition of any part of their anatomy compared to control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00027756

1 Strain

WormBase ID
WBStrain00026932