WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00068218 Genotype  glp-1(or178)
Phenotype Remark  The Phenotype reported is relevant to the genetic interaction observed. It it NOT a Phenotype induced by RNAi alone. Remark  To systematically test for genetic interactions between query-target pairs, worms harboring a weak loss-of-function mutation in a query gene were targeted for RNAi-mediated reduction of function in a second (target) gene by feeding the appropriate dsRNA. 11 query genes and 858 target genes were tested.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021009 afd-1 W03F11.6 Caenorhabditis elegans

15 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W03F11.6g W03F11.6g 4149   I: 2172031-2172170
CDS:W03F11.6i W03F11.6i 3963   I: 2173800-2173866
CDS:W03F11.6l W03F11.6l 3396   I: 2185757-2185918
CDS:W03F11.6e W03F11.6e 3759   I: 2192428-2192747
CDS:W03F11.6m W03F11.6m 3438   I: 2192845-2192905
CDS:W03F11.6n W03F11.6n 3150   I: 2192845-2192905
CDS:W03F11.6b W03F11.6b 2037   I: 2197988-2198011
CDS:W03F11.6a W03F11.6a 4977   I: 2160071-2160199
CDS:W03F11.6c W03F11.6c 4983   I: 2160071-2160199
CDS:W03F11.6d W03F11.6d 4689   I: 2160071-2160199
CDS:W03F11.6f W03F11.6f 4695   I: 2160071-2160199
CDS:W03F11.6h W03F11.6h 3861   I: 2172031-2172170
CDS:W03F11.6j W03F11.6j 3675   I: 2173800-2173866
CDS:W03F11.6k W03F11.6k 3684   I: 2185757-2185918
CDS:W03F11.6o W03F11.6o 4497   I: 2168112-2168432

1 Laboratories

Primary Identifier
RP

1 Phenotype

Identifier Name Description
WBPhenotype:0000531 organism development variant Any variation in the progression of a worm at any time from its fertilization to adulthood compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00031036

0 Strain