WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00107722 Phenotype Remark  "Of the 37 genes, 7 exhibited extremely significant defects in utse development (Table 2A): helicase dog-1, the serine carboxypeptidase F41C3.5, the phosphatase gsp-1, the EGF vulval induction gene lin-3, the cell fusion annexin nex-1, the divergent Rab GTPase RASEF/rsef-1 (formerly known as tag-312), and the GNEF (guanine nucleotide exchange factor) Trio-like protein unc-73 (Youds et_al, 2007; Saleh et_al, 2006; Hristova et_al, 2005; Rutledge et_al, 2002; Hill and Sternberg, 1992, 2004; Satoh et_al, 2000; Daigle and Creutz, 1999; Shaye and Greenwald, 2011; Schmidt et_al, 2009; Stringham et_al, 2002; Wu et_al, 2002)."
Remark  (Table 2) lin-3 RNAi
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002992 lin-3 F36H1.4 Caenorhabditis elegans

8 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F36H1.4a F36H1.4a 1317   IV: 11057814-11057868
CDS:F36H1.4b F36H1.4b 1311   IV: 11057814-11057868
CDS:F36H1.4g F36H1.4g 1395   IV: 11057814-11057868
CDS:F36H1.4h F36H1.4h 1266   IV: 11057814-11057868
CDS:F36H1.4f F36H1.4f 1434   IV: 11057814-11057868
CDS:F36H1.4e F36H1.4e 1299   IV: 11059299-11059341
CDS:F36H1.4c F36H1.4c 1272   IV: 11057814-11057868
CDS:F36H1.4d F36H1.4d 1389   IV: 11057814-11057868

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0000529 cell development variant Any variation in the progression of a cell from when it is first formed to when it becomes a mature structure when compared to control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00045833

0 Strain