WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00088847 Genotype  rtEx583[hsp::glp-1(RNAi);hsp::lin-12(RNAi);pha-1(+)]; pha-1(e2123)III
Phenotype Remark  [hsp::glp-1(RNAi)];[hsp::lin-12(RNAi)] animals take more time to respond to octanol compared to wild type (N2) animals on control RNAi. Remark  glp-1(RNAi) and lin-12(RNAi) induced by heat shock from transgenes; Authors state that a 500bp fragment spanning glp-1 exon 4 was used. glp-1 exon 4 is 909bp; first 500bp of exon 4 used for curation.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001609 glp-1 F02A9.6 Caenorhabditis elegans
WBGene00003001 lin-12 R107.8 Caenorhabditis elegans

2 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F02A9.6 F02A9.6 3888   III: 9092313-9092452
CDS:R107.8 R107.8 4290   III: 9060402-9060524

1 Laboratories

Primary Identifier
HA

1 Phenotype

Identifier Name Description
WBPhenotype:0000412 octanol chemotaxis defective Failure to execute the characteristic response to 1-octanol as defined by control animals. In C.elegans 1-octanol is typically a repellant.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00038400

0 Strain