WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00091280 Genotype  unc-119(ed3) III; cbgIs98[pPept-1:GFP::rab-11.1;unc-119(+)]
Phenotype Remark  RNAi of arp-1 results in ectopic clusters of GFP::RAB-11 labeled recycling endosomes (REs) at the basolateral periphery of intestinal cells Remark  (Figure 4c) Y53F4B.22/arp-1 RNAi

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013168 arp-1 Y53F4B.22 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y53F4B.22a Y53F4B.22a 1125   II: 15120309-15120401

1 Laboratories

Primary Identifier
MZE

2 Phenotype

Identifier Name Description
WBPhenotype:0000679 transgene subcellular localization variant Any variation in the subcellular localization of a gene product produced by DNA coded for by exogenous genetic material that has been introduced into the organism compared to its expression in control animals.
WBPhenotype:0002107 RAB-11 recycling endosome localization variant Any variation in the subcellular localization of membrane bound organelles, known as recycling endosomes, positive for the RAB protein RAB-11, that traffic material from early endosomes back to the plasma membrane of the cell, thereby recycling recently endocytosed material to be reused at the plasma membrane.

2 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000436 protein subcellular localization variant Any variation in the placement of a protein within in a cell or cellular compartment compared to control.
WBPhenotype:0001587 actin organization biogenesis phenotype Animals exhibit variations in the formation and/or arrangement of actin, an abundant cytoskeletal protein in most cells, often linked to the plasma membrane and concentrated at cell junctions compared to control (Wormatlas).

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00041129

0 Strain