WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00099028 Phenotype Remark  HMP-2 mislocalizes to the nucleus after frk-1 RNAi treatment. Authors used FLAG epitope-tagged HMP-2, and when expressed in the epidermis, it was nuclear-excluded throughout embryogenesis. However, after RNAi of frk-1, partial nuclear localization of FLAG-HMP-2 is observed throughout these cells.
Remark  Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation. Method of delivery not explicit, authors say injection or soaking.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001487 frk-1 T04B2.2 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T04B2.2a T04B2.2a 1173   IV: 10044263-10044564

1 Laboratories

Primary Identifier
JR

1 Phenotype

Identifier Name Description
WBPhenotype:0000436 protein subcellular localization variant Any variation in the placement of a protein within in a cell or cellular compartment compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00037107

0 Strain