WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Expression Cluster :

Algorithm  All available microarray datasets for the GPL200 platform (Affymetrix C. elegans Genome Array) were obtained from the GEO repository. This included 2243 individual microarray experiments. These were normalized against each other with the software RMAexpress (Bolstad, 2014). Based on these normalized values, Pearsons correlation coefficients were obtained for each probe-probe pair of the 22,620 probes represented on this array type. The resulting list of correlation coefficients was then ranked to generate the ranked coexpression database with information on each probe represented on the GPL200 platform. Description  Coexpression clique No. 227, T28A11.5-T06C12.14, on the genome-wide coexpression clique map for the nematode GPL200 platform.
Primary Identifier  WBPaper00061527:T28A11.5-T06C12.14

0 Anatomy Terms

9 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006979 zig-2 F42F12.2 Caenorhabditis elegans
WBGene00008679 F11A5.13 F11A5.13 Caenorhabditis elegans
WBGene00011158 chil-16 R09D1.2 Caenorhabditis elegans
WBGene00011521 T06C12.14 T06C12.14 Caenorhabditis elegans
WBGene00013935 ZK218.1 ZK218.1 Caenorhabditis elegans
WBGene00016693 srbc-20 C45H4.11 Caenorhabditis elegans
WBGene00022553 srlf-29 ZC204.1 Caenorhabditis elegans
WBGene00020872 T28A11.5 T28A11.5 Caenorhabditis elegans
WBGene00015878 C17B7.4 C17B7.4 Caenorhabditis elegans

0 Life Stages

0 Processes

0 Regulated By Gene

0 Regulated By Molecule