WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Expression Cluster :

Algorithm  A gene model was built based on the WS260 annotation. Tag counts for each gene were extracted from STAR aligned BAM files, anddifferential gene expression between N2 and mutant backgrounds was tested using DESeq2. A false discovery rate(FDR) < 0.01 and LFC > 0.5849 was used to define genes as upregulated, and FDR < 0.01 and LFC < -1 was used to define genes asdownregulated. Description  Transcripts that showed significantly increased expression in efl-1(se1) comparing to in N2 animals at starved L1 larva stage.
Primary Identifier  WBPaper00062056:efl-1(se1)_upregulated

0 Anatomy Terms

102 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000098 air-1 K07C11.2 Caenorhabditis elegans
WBGene00000099 air-2 B0207.4 Caenorhabditis elegans
WBGene00000142 aos-1 C08B6.9 Caenorhabditis elegans
WBGene00000413 cdt-1 Y54E10A.15 Caenorhabditis elegans
WBGene00000484 che-2 F38G1.1 Caenorhabditis elegans
WBGene00000485 che-3 F18C12.1 Caenorhabditis elegans
WBGene00000490 che-11 C27A7.4 Caenorhabditis elegans
WBGene00000520 cku-80 R07E5.8 Caenorhabditis elegans
WBGene00000702 col-128 F12F6.9 Caenorhabditis elegans
WBGene00000875 cyk-4 K08E3.6 Caenorhabditis elegans
WBGene00001016 dna-2 F43G6.1 Caenorhabditis elegans
WBGene00001049 dog-1 F33H2.1 Caenorhabditis elegans
WBGene00001061 dpl-1 T23G7.1 Caenorhabditis elegans
WBGene00001102 dsh-2 C27A2.6 Caenorhabditis elegans
WBGene00001129 dyf-13 C27H5.7 Caenorhabditis elegans
WBGene00001372 exo-3 R09B3.1 Caenorhabditis elegans
WBGene00001606 gln-5 F26D10.10 Caenorhabditis elegans
WBGene00001688 gpr-1 F22B7.13 Caenorhabditis elegans
WBGene00001689 gpr-2 C38C10.4 Caenorhabditis elegans
WBGene00001869 him-10 R12B2.4 Caenorhabditis elegans
WBGene00002047 icp-1 Y39G10AR.13 Caenorhabditis elegans
WBGene00002068 ify-1 C27A2.3 Caenorhabditis elegans
WBGene00002073 ima-2 F26B1.3 Caenorhabditis elegans
WBGene00002231 knl-1 C02F5.1 Caenorhabditis elegans
WBGene00002297 ect-2 T19E10.1 Caenorhabditis elegans
WBGene00002985 lig-1 C29A12.3 Caenorhabditis elegans
WBGene00003020 lin-35 C32F10.2 Caenorhabditis elegans
WBGene00003155 mcm-3 C25D7.6 Caenorhabditis elegans
WBGene00003158 mcm-6 ZK632.1 Caenorhabditis elegans
WBGene00003161 mdf-2 Y69A2AR.30 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The first stage larva. At 25 Centigrade, it ranges 14-25.5 hours after fertilization, 0-11.5 hours after hatch. L1 larva Ce WBls:0000024

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001161 efl-1 Y102A5C.18 Caenorhabditis elegans

0 Regulated By Molecule