WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Expression Cluster :

Algorithm  All mass spectrometric raw data were processed with Maxquant (version 1.5.3.8) using default parameters. Briefly, MS2 spectra were searched against the C. elegans WormBase ParaSite database (PRJNA13758, downloaded at: 15.04.2021) including a list of common contaminants. False discovery rates on protein and PSM level were estimated by the target-decoy approach to 1% (Protein FDR) and 1% (PSM FDR) respectively. The minimal peptide length was set to 7 amino acids and carbamidomethylation at cysteine residues was considered as a fixed modification Description  Proteins that interacted with KLF-1-HA in co-IP analysis.
Primary Identifier  WBPaper00064705:KLF-1_interacting

0 Anatomy Terms

94 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000219 asp-6 F21F8.7 Caenorhabditis elegans
WBGene00000226 atl-1 T06E4.3 Caenorhabditis elegans
WBGene00000552 cmd-1 T21H3.3 Caenorhabditis elegans
WBGene00001209 egl-45 C27D11.1 Caenorhabditis elegans
WBGene00001443 fli-1 B0523.5 Caenorhabditis elegans
WBGene00001488 frm-1 ZK270.2 Caenorhabditis elegans
WBGene00001572 gei-15 M03A8.4 Caenorhabditis elegans
WBGene00001684 gpd-2 K10B3.8 Caenorhabditis elegans
WBGene00001746 gsk-3 Y18D10A.5 Caenorhabditis elegans
WBGene00001755 gst-7 F11G11.2 Caenorhabditis elegans
WBGene00001794 gta-1 K04D7.3 Caenorhabditis elegans
WBGene00001860 him-1 F28B3.7 Caenorhabditis elegans
WBGene00001898 his-24 M163.3 Caenorhabditis elegans
WBGene00002036 hum-2 F36D4.3 Caenorhabditis elegans
WBGene00002038 hum-5 T02C12.1 Caenorhabditis elegans
WBGene00002074 ima-3 F32E10.4 Caenorhabditis elegans
WBGene00002134 inx-12 ZK770.3 Caenorhabditis elegans
WBGene00002263 lea-1 K08H10.1 Caenorhabditis elegans
WBGene00002999 lin-10 C09H6.2 Caenorhabditis elegans
WBGene00003418 msh-2 H26D21.2 Caenorhabditis elegans
WBGene00004090 eif-2Bgamma C15F1.4 Caenorhabditis elegans
WBGene00004130 ketn-1 F54E2.3 Caenorhabditis elegans
WBGene00004258 pyc-1 D2023.2 Caenorhabditis elegans
WBGene00004391 rnr-1 T23G5.1 Caenorhabditis elegans
WBGene00004405 rop-1 C12D8.11 Caenorhabditis elegans
WBGene00004758 sek-1 R03G5.2 Caenorhabditis elegans
WBGene00006757 unc-18 F27D9.1 Caenorhabditis elegans
WBGene00006764 unc-27 ZK721.2 Caenorhabditis elegans
WBGene00006810 unc-78 C04F6.4 Caenorhabditis elegans
WBGene00007108 gspd-1 B0035.5 Caenorhabditis elegans

0 Life Stages

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018990 klf-1 F56F11.3 Caenorhabditis elegans

0 Regulated By Molecule