WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Expression Cluster :

Algorithm  All available microarray datasets for the GPL200 platform (Affymetrix C. elegans Genome Array) were obtained from the GEO repository. This included 2243 individual microarray experiments. These were normalized against each other with the software RMAexpress (Bolstad, 2014). Based on these normalized values, Pearsons correlation coefficients were obtained for each probe-probe pair of the 22,620 probes represented on this array type. The resulting list of correlation coefficients was then ranked to generate the ranked coexpression database with information on each probe represented on the GPL200 platform. Description  Coexpression clique No. 172, hlh-30_18579-unc-43_21739, on the genome-wide coexpression clique map for the nematode GPL200 platform.
Primary Identifier  WBPaper00061527:hlh-30_18579-unc-43_21739

0 Anatomy Terms

84 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000100 ajm-1 C25A11.4 Caenorhabditis elegans
WBGene00000237 bam-2 Y71F9AR.1 Caenorhabditis elegans
WBGene00000402 cdh-10 C45G7.5 Caenorhabditis elegans
WBGene00000912 daf-16 R13H8.1 Caenorhabditis elegans
WBGene00001130 dyn-1 C02C6.1 Caenorhabditis elegans
WBGene00001182 egl-13 T22B7.1 Caenorhabditis elegans
WBGene00001196 egl-30 M01D7.7 Caenorhabditis elegans
WBGene00001441 fkh-9 K03C7.2 Caenorhabditis elegans
WBGene00001560 gei-3 T22H6.6 Caenorhabditis elegans
WBGene00001631 gly-6 H38K22.5 Caenorhabditis elegans
WBGene00001679 gpb-1 F13D12.7 Caenorhabditis elegans
WBGene00002173 itr-1 F33D4.2 Caenorhabditis elegans
WBGene00002189 kin-1 ZK909.2 Caenorhabditis elegans
WBGene00002263 lea-1 K08H10.1 Caenorhabditis elegans
WBGene00002978 lev-11 Y105E8B.1 Caenorhabditis elegans
WBGene00003048 lit-1 W06F12.1 Caenorhabditis elegans
WBGene00003186 mek-2 Y54E10BL.6 Caenorhabditis elegans
WBGene00003423 msi-1 R10E9.1 Caenorhabditis elegans
WBGene00003559 ncl-1 ZK112.2 Caenorhabditis elegans
WBGene00003732 nhx-4 F14B8.1 Caenorhabditis elegans
WBGene00003916 par-1 H39E23.1 Caenorhabditis elegans
WBGene00004183 prk-2 F45H7.4 Caenorhabditis elegans
WBGene00004245 puf-9 W06B11.2 Caenorhabditis elegans
WBGene00004313 rbc-1 F54E4.1 Caenorhabditis elegans
WBGene00004375 rme-4 F46F6.1 Caenorhabditis elegans
WBGene00004749 sdn-1 F57C7.3 Caenorhabditis elegans
WBGene00004751 sea-2 K10G6.3 Caenorhabditis elegans
WBGene00004900 snf-1 W03G9.1 Caenorhabditis elegans
WBGene00006331 sup-26 R10E4.2 Caenorhabditis elegans
WBGene00006423 asd-2 T21G5.5 Caenorhabditis elegans

0 Life Stages

0 Processes

0 Regulated By Gene

0 Regulated By Molecule