WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Expression Cluster :

Algorithm  Differential gene expression analysis was performed using limma-voom filtering out undetected and lowly expressed genes (CPM < 1). An adjusted p-value of 0.05 and fold-change > 2 cutoff was used to define differentially expressed genes. Description  Transcripts that showed significantly increased expression in pnp-1(RNAi) comparing to in animals fed with empty vector.
Primary Identifier  WBPaper00067866:pnp-1(RNAi)_upregulated

0 Anatomy Terms

19 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007659 pals-5 C17H1.6 Caenorhabditis elegans
WBGene00008267 C53A5.9 C53A5.9 Caenorhabditis elegans
WBGene00018643 drd-50 F49F1.1 Caenorhabditis elegans
WBGene00018647 F49F1.7 F49F1.7 Caenorhabditis elegans
WBGene00045401 eol-1 T26F2.3 Caenorhabditis elegans
WBGene00007656 pals-2 C17H1.3 Caenorhabditis elegans
WBGene00044708 pals-11 C17H1.13 Caenorhabditis elegans
WBGene00044237 pals-9 C17H1.10 Caenorhabditis elegans
WBGene00007660 pals-6 C17H1.7 Caenorhabditis elegans
WBGene00009061 pals-14 F22G12.1 Caenorhabditis elegans
WBGene00020357 T08E11.1 T08E11.1 Caenorhabditis elegans
WBGene00012091 pals-29 T27E7.6 Caenorhabditis elegans
WBGene00013294 pals-30 Y57G11B.1 Caenorhabditis elegans
WBGene00022545 ZC196.1 ZC196.1 Caenorhabditis elegans
WBGene00015223 B0507.6 B0507.6 Caenorhabditis elegans
WBGene00015224 B0507.7 B0507.7 Caenorhabditis elegans
WBGene00015227 ddn-1 B0507.10 Caenorhabditis elegans
WBGene00015225 B0507.8 B0507.8 Caenorhabditis elegans
WBGene00008302 pals-38 C54D10.8 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 24-48 hours after L4-adult molt. 4-5 days after first cleavage. 1-day post-L4 adult hermaphrodite Ce WBls:0000064

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019298 pnp-1 K02D7.1 Caenorhabditis elegans

0 Regulated By Molecule