WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Expression Cluster :

Algorithm  Differential expression analysis was performed using DESeq2 v1.6.3 in R version 3.2.3. All analyses were performed with genes that had average expression level above 1 RPKM (fragments per kilobase per million, as calculated by Cufflinks). Description  Transcripts that showed significantly increased expression (fold change > 2, adjusted p-value < 0.05) in RB2301[cec-4(ok3124)] injected with vector RNAi, comparing to in control animals (N2 injected with vector RNAi).
Primary Identifier  WBPaper00050193:cec-4(ok3124)_upregulated_L1

0 Anatomy Terms

207 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000097 aip-1 F58E10.4 Caenorhabditis elegans
WBGene00000174 aqp-6 C32C4.2 Caenorhabditis elegans
WBGene00000503 cht-1 C04F6.3 Caenorhabditis elegans
WBGene00000560 cnc-6 Y46E12A.1 Caenorhabditis elegans
WBGene00000601 col-12 F15H10.1 Caenorhabditis elegans
WBGene00000621 col-44 F54B11.2 Caenorhabditis elegans
WBGene00000671 col-96 Y41C4A.19 Caenorhabditis elegans
WBGene00000715 col-142 T15B7.4 Caenorhabditis elegans
WBGene00000723 col-150 B0024.2 Caenorhabditis elegans
WBGene00000734 col-161 C50B6.4 Caenorhabditis elegans
WBGene00000750 col-177 F59F3.2 Caenorhabditis elegans
WBGene00001133 eat-2 Y48B6A.4 Caenorhabditis elegans
WBGene00001150 ech-1.1 C29F3.1 Caenorhabditis elegans
WBGene00001158 ech-9 F01G10.3 Caenorhabditis elegans
WBGene00001487 frk-1 T04B2.2 Caenorhabditis elegans
WBGene00001532 gcy-5 ZK970.6 Caenorhabditis elegans
WBGene00001694 grd-5 F41E6.2 Caenorhabditis elegans
WBGene00002016 hsp-16.2 Y46H3A.3 Caenorhabditis elegans
WBGene00002017 hsp-16.11 T27E4.2 Caenorhabditis elegans
WBGene00002018 hsp-16.41 Y46H3A.2 Caenorhabditis elegans
WBGene00002094 ins-11 C17C3.4 Caenorhabditis elegans
WBGene00002103 ins-20 ZK84.7 Caenorhabditis elegans
WBGene00002270 lec-7 R07B1.2 Caenorhabditis elegans
WBGene00003096 lys-7 C02A12.4 Caenorhabditis elegans
WBGene00003548 nas-30 Y95B8A.1 Caenorhabditis elegans
WBGene00003573 ncx-8 C13D9.7 Caenorhabditis elegans
WBGene00003589 nex-2 T07C4.9 Caenorhabditis elegans
WBGene00003765 nlp-27 B0213.2 Caenorhabditis elegans
WBGene00003766 nlp-28 B0213.3 Caenorhabditis elegans
WBGene00003767 nlp-29 B0213.4 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The first stage larva. At 25 Centigrade, it ranges 14-25.5 hours after fertilization, 0-11.5 hours after hatch. L1 larva Ce WBls:0000024

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017990 cec-4 F32E10.2 Caenorhabditis elegans

0 Regulated By Molecule