WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Expression Cluster :

Algorithm  DeSeq2 (v. 1.42.0), Wald analyses testing against a null hypothesis of < |1.5|-fold change in gene expression between treatments (BenjaminiHochberg adjusted false detection rate of p <= 0.05. Description  Transcripts that showed significantly increased expression in animals experimentally colonised by a wild microbiota community and infected by the widespread animal pathogen, Staphylococcus aureus, comparing to animals not colonized by microbiota but infected by pathogen.
Primary Identifier  WBPaper00067479:Microbiota-Pathogen_vs_Pathogen_upregulated Regulated By Treatment  Bacteria infection: Staphylococcus aureus

0 Anatomy Terms

76 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000211 asm-1 B0252.2 Caenorhabditis elegans
WBGene00000213 asm-3 W03G1.7 Caenorhabditis elegans
WBGene00000535 cpi-1 K08B4.6 Caenorhabditis elegans
WBGene00000560 cnc-6 Y46E12A.1 Caenorhabditis elegans
WBGene00000650 col-74 ZK1248.2 Caenorhabditis elegans
WBGene00000782 cpr-2 F36D3.9 Caenorhabditis elegans
WBGene00001500 ftn-1 C54F6.14 Caenorhabditis elegans
WBGene00001920 his-46 B0035.9 Caenorhabditis elegans
WBGene00001930 his-56 F54E12.3 Caenorhabditis elegans
WBGene00001934 his-60 F55G1.11 Caenorhabditis elegans
WBGene00002012 hsp-12.3 F38E11.1 Caenorhabditis elegans
WBGene00002013 hsp-12.6 F38E11.2 Caenorhabditis elegans
WBGene00002017 hsp-16.11 T27E4.2 Caenorhabditis elegans
WBGene00002265 lec-2 F52H3.7 Caenorhabditis elegans
WBGene00003617 nhr-18 F44C8.3 Caenorhabditis elegans
WBGene00003995 pgp-1 K08E7.9 Caenorhabditis elegans
WBGene00004954 spd-3 H34C03.1 Caenorhabditis elegans
WBGene00005551 sri-39 F33H12.2 Caenorhabditis elegans
WBGene00005685 sru-22 F36G9.5 Caenorhabditis elegans
WBGene00006611 tre-5 C23H3.7 Caenorhabditis elegans
WBGene00007581 alkb-8 C14B1.10 Caenorhabditis elegans
WBGene00007833 oac-6 C31A11.5 Caenorhabditis elegans
WBGene00007859 mrps-31 C32A3.2 Caenorhabditis elegans
WBGene00007875 dod-24 C32H11.12 Caenorhabditis elegans
WBGene00007919 cup-16 C34C6.7 Caenorhabditis elegans
WBGene00008575 scl-24 F08E10.7 Caenorhabditis elegans
WBGene00008584 irg-4 F08G5.6 Caenorhabditis elegans
WBGene00008592 hsp-16.21 F08H9.4 Caenorhabditis elegans
WBGene00009291 clec-264 F31D4.4 Caenorhabditis elegans
WBGene00010124 mbug-1 F55G11.4 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 24-48 hours after L4-adult molt. 4-5 days after first cleavage. 1-day post-L4 adult hermaphrodite Ce WBls:0000064

0 Processes

0 Regulated By Gene

0 Regulated By Molecule