WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Expression Cluster :

Algorithm  DESeq2, Q value < 0.01. Description  Transcripts that showed significantly increased expression in mir-1(n4101).
Primary Identifier  WBPaper00066659:mir-1(n4101)_upregulated

0 Anatomy Terms

287 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000098 air-1 K07C11.2 Caenorhabditis elegans
WBGene00000099 air-2 B0207.4 Caenorhabditis elegans
WBGene00000257 bmk-1 F23B12.8 Caenorhabditis elegans
WBGene00000265 brd-1 K04C2.4 Caenorhabditis elegans
WBGene00000275 bub-1 R06C7.8 Caenorhabditis elegans
WBGene00000375 cyp-44A1 ZK177.5 Caenorhabditis elegans
WBGene00000405 cdk-1 T05G5.3 Caenorhabditis elegans
WBGene00000406 cdk-4 F18H3.5 Caenorhabditis elegans
WBGene00000411 cdl-1 R06F6.1 Caenorhabditis elegans
WBGene00000413 cdt-1 Y54E10A.15 Caenorhabditis elegans
WBGene00000422 ced-8 F08F1.5 Caenorhabditis elegans
WBGene00000468 ces-1 F43G9.11 Caenorhabditis elegans
WBGene00000498 chk-1 Y39H10A.7 Caenorhabditis elegans
WBGene00000503 cht-1 C04F6.3 Caenorhabditis elegans
WBGene00000561 cnd-1 C34E10.7 Caenorhabditis elegans
WBGene00000794 crn-1 Y47G6A.8 Caenorhabditis elegans
WBGene00000799 crn-6 K04H4.6 Caenorhabditis elegans
WBGene00000804 csc-1 Y48E1B.12 Caenorhabditis elegans
WBGene00000863 cya-1 ZK507.6 Caenorhabditis elegans
WBGene00000870 cyd-1 Y38F1A.5 Caenorhabditis elegans
WBGene00000972 dhs-8 K10H10.3 Caenorhabditis elegans
WBGene00001049 dog-1 F33H2.1 Caenorhabditis elegans
WBGene00001102 dsh-2 C27A2.6 Caenorhabditis elegans
WBGene00001105 dsl-3 Y41D4B.10 Caenorhabditis elegans
WBGene00001161 efl-1 Y102A5C.18 Caenorhabditis elegans
WBGene00001372 exo-3 R09B3.1 Caenorhabditis elegans
WBGene00001434 fkh-2 T14G12.4 Caenorhabditis elegans
WBGene00001511 fzy-1 ZK177.6 Caenorhabditis elegans
WBGene00001688 gpr-1 F22B7.13 Caenorhabditis elegans
WBGene00001689 gpr-2 C38C10.4 Caenorhabditis elegans

2 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The C. elegans life stage spanning 390-420min after first cleavage at 20 Centigrade. Cell number remains at ~560 cells, with some new cells generated and some cells go through programmed cell death. The shape of embryo looks like a comma. A stage between bean embryo and 1.5-fold embryo. comma embryo Ce WBls:0000017
  The C. elegans life stage spanning 350-390min after first cleavage at 20 Centigrade. Cell number remains at ~560 cells, with some new cells generated and some cells go through programmed cell death. Emrbyo elongation started but have not formed comma shape yet. The shape of embryo looks like a lima bean. A stage right before comma embryo. Also called lima embryo or lima bean stage. bean embryo Ce WBls:0000016

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003260 mir-1 T09B4.11 Caenorhabditis elegans

0 Regulated By Molecule