WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Expression Cluster :

Algorithm  A gene model was built based on the WS260 annotation. Tag counts for each gene were extracted from STAR aligned BAM files, anddifferential gene expression between N2 and mutant backgrounds was tested using DESeq2. A false discovery rate(FDR) < 0.01 and LFC > 0.5849 was used to define genes as upregulated, and FDR < 0.01 and LFC < -1 was used to define genes asdownregulated. Description  Transcripts that showed significantly decreased expression in met-2(n4256) comparing to in N2 animals at starved L1 larva stage.
Primary Identifier  WBPaper00062056:met-2(n4256)_downregulated

0 Anatomy Terms

37 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001397 fat-5 W06D12.3 Caenorhabditis elegans
WBGene00001785 gst-37 Y32G9A.1 Caenorhabditis elegans
WBGene00003093 lys-4 F58B3.1 Caenorhabditis elegans
WBGene00003163 mdl-1 R03E9.1 Caenorhabditis elegans
WBGene00003658 nhr-68 H12C20.3 Caenorhabditis elegans
WBGene00004227 ptr-13 K07C10.1 Caenorhabditis elegans
WBGene00006530 tba-4 F44F4.11 Caenorhabditis elegans
WBGene00006861 cal-5 C24H10.5 Caenorhabditis elegans
WBGene00008233 C50F4.8 C50F4.8 Caenorhabditis elegans
WBGene00008334 sdz-8 C55A6.5 Caenorhabditis elegans
WBGene00008335 C55A6.6 C55A6.6 Caenorhabditis elegans
WBGene00008412 D2030.2 D2030.2 Caenorhabditis elegans
WBGene00009221 acs-2 F28F8.2 Caenorhabditis elegans
WBGene00009778 F46C5.1 F46C5.1 Caenorhabditis elegans
WBGene00010790 adh-1 K12G11.3 Caenorhabditis elegans
WBGene00011325 T01C3.11 T01C3.11 Caenorhabditis elegans
WBGene00011416 T04A11.1 T04A11.1 Caenorhabditis elegans
WBGene00011417 T04A11.2 T04A11.2 Caenorhabditis elegans
WBGene00011419 T04A11.4 T04A11.4 Caenorhabditis elegans
WBGene00011420 T04A11.5 T04A11.5 Caenorhabditis elegans
WBGene00012688 Y39B6A.29 Y39B6A.29 Caenorhabditis elegans
WBGene00013499 Y70G10A.3 Y70G10A.3 Caenorhabditis elegans
WBGene00015512 mthf-1 C06A8.1 Caenorhabditis elegans
WBGene00016630 acer-1 C44B7.10 Caenorhabditis elegans
WBGene00016943 acdh-1 C55B7.4 Caenorhabditis elegans
WBGene00017659 F21C10.10 F21C10.10 Caenorhabditis elegans
WBGene00017787 nhr-141 F25E5.6 Caenorhabditis elegans
WBGene00018755 bcmo-2 F53C3.12 Caenorhabditis elegans
WBGene00020016 lipl-3 R11G11.14 Caenorhabditis elegans
WBGene00020909 W01A11.1 W01A11.1 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The first stage larva. At 25 Centigrade, it ranges 14-25.5 hours after fertilization, 0-11.5 hours after hatch. L1 larva Ce WBls:0000024

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019883 met-2 R05D3.11 Caenorhabditis elegans

0 Regulated By Molecule