WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Expression Cluster :

Algorithm  DESeq2 v1.36.0, fold change > 2, FDR < 0.05. Description  Transcripts that showed significantly increased expression in shk-1(yum1003) animals infected by bacteria strain Vibrio cholerae A1552.
Primary Identifier  WBPaper00067803:V.cholerae_upregulated_shk-1(yum1003) Regulated By Treatment  Bacteria infection: Vibrio cholerae A1552, 8 hours at L4 larva stage.

0 Anatomy Terms

2698 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000007 aat-6 T11F9.4 Caenorhabditis elegans
WBGene00000009 aat-8 F28F9.4 Caenorhabditis elegans
WBGene00000019 abt-1 C24F3.5 Caenorhabditis elegans
WBGene00000020 abt-2 F12B6.1 Caenorhabditis elegans
WBGene00000023 abt-5 Y53C10A.9 Caenorhabditis elegans
WBGene00000024 abu-1 AC3.3 Caenorhabditis elegans
WBGene00000029 abu-6 C03A7.7 Caenorhabditis elegans
WBGene00000030 abu-7 C03A7.8 Caenorhabditis elegans
WBGene00000031 abu-8 C03A7.14 Caenorhabditis elegans
WBGene00000033 abu-10 F35A5.3 Caenorhabditis elegans
WBGene00000034 abu-11 T01D1.6 Caenorhabditis elegans
WBGene00000051 acr-12 R01E6.4 Caenorhabditis elegans
WBGene00000134 amt-2 F49E11.3 Caenorhabditis elegans
WBGene00000190 warf-1 F45E4.1 Caenorhabditis elegans
WBGene00000214 asp-1 Y39B6A.20 Caenorhabditis elegans
WBGene00000218 asp-5 F21F8.3 Caenorhabditis elegans
WBGene00000219 asp-6 F21F8.7 Caenorhabditis elegans
WBGene00000238 bar-1 C54D1.6 Caenorhabditis elegans
WBGene00000251 bli-1 C09G5.6 Caenorhabditis elegans
WBGene00000252 bli-2 F59E12.12 Caenorhabditis elegans
WBGene00000302 cav-2 C56A3.7 Caenorhabditis elegans
WBGene00000389 cdc-25.4 R05H5.2 Caenorhabditis elegans
WBGene00000522 clc-1 C09F12.1 Caenorhabditis elegans
WBGene00000546 clp-6 Y77E11A.10 Caenorhabditis elegans
WBGene00000603 col-14 C46A5.3 Caenorhabditis elegans
WBGene00000606 col-17 F11G11.10 Caenorhabditis elegans
WBGene00000615 col-38 F54C9.4 Caenorhabditis elegans
WBGene00000624 col-47 Y18H1A.12 Caenorhabditis elegans
WBGene00000625 col-48 Y54E10BL.2 Caenorhabditis elegans
WBGene00000626 col-49 K09H9.3 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The fourth stage larva. At 25 Centigrade, it ranges 40-49.5 hours after fertilization, 26-35.5 hours after hatch. L4 larva Ce WBls:0000038

0 Processes

0 Regulated By Gene

0 Regulated By Molecule