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Transcripts enriched in EVN neurons, by comparing expressin in EVN cells and in whole worm lysates. |
DESeq was used. Genes overexpressed 2 - 11 fold in EVNs were considered differentially expressed. |
WBPaper00049001:EVN_enriched
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Top 300 transcripts enriched in ADE, AQR, BAG, CEP, FLP, IL1 neuron, IL2 neuron, OLL, OLQ, PDE, PHA, PHB, PQR, PVR according to single cell RNAseq. |
Top 300 enriched transcripts were determined by log2.ratio of the tpm in the cell type vs the tpm in the other cells * the log2 of the cell.type tpm. |
WBPaper00061340:Ciliated_non_amphid_neuron
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Single-cell RNA-Seq cell group 109 expressed in: IL2. |
CellRanger, DecontX, Monocle3, Louvain algorithm. |
WBPaper00065623:109
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Transcripts that showed significantly altered expression in daf-2(e1370) comparing to in N2 in cell cluster IL2_2. |
fold change > 2, FDR < 0.05 |
WBPaper00067693:daf-2(e1370)_downregulated_IL2_2
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Transcripts that showed significantly altered expression in daf-2(e1370) comparing to in N2 in cell cluster IL2_1. |
fold change > 2, FDR < 0.05 |
WBPaper00067693:daf-2(e1370)_upregulated_IL2_1
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Transcripts that showed significantly altered expression in daf-2(e1370) comparing to in N2 in cell cluster IL2_2. |
fold change > 2, FDR < 0.05 |
WBPaper00067693:daf-2(e1370)_upregulated_IL2_2
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Transcripts that showed significantly altered expression in daf-2(e1370) comparing to in N2 in cell cluster IL2_1. |
fold change > 2, FDR < 0.05 |
WBPaper00067693:daf-2(e1370)_downregulated_IL2_1
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