WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Anatomy Term :

Definition  Neuron class of two interneuron motoneurons that innervate muscles in the head via NMJs in the nerve ring. Name  RIM
Primary Identifier  WBbt:0005835
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2 Children

Definition Name Synonym Primary Identifier
Ring motor neuron RIML lineage name: ABplppaapap WBbt:0003926
Ring motor neuron RIMR lineage name: ABprppaapap WBbt:0005053

8 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts expressed in NMDA neuron, according to PAT-Seq analysis using Pnmr-1-GFP-3XFLAG mRNA tagging. Cufflinks FPKM value >=1. WBPaper00050990:NMDA-neuron_expressed
  Transcripts uniquely expressed in NMDA neuron, according to PAT-Seq analysis using Pnmr-1-GFP-3XFLAG mRNA tagging. Cufflinks FPKM value >=1. WBPaper00050990:NMDA-neuron_enriched
  Transcripts that showed significantly altered expression in male comparing to in hermaprhodite animals in cell cluster RIM.txt. fold change > 2, FDR < 0.05 WBPaper00068349:male_downregulated_RIM.txt
  Transcripts that showed significantly altered expression in male comparing to in hermaprhodite animals in cell cluster RIM.txt. fold change > 2, FDR < 0.05 WBPaper00068349:male_upregulated_RIM.txt
  Single-cell RNA-Seq cell group 138 expressed in: RIM. CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:138
  Transcripts that showed significantly altered expression in daf-2(e1370) comparing to in N2 in cell cluster RIM. fold change > 2, FDR < 0.05 WBPaper00067693:daf-2(e1370)_upregulated_RIM
  Transcripts that showed significantly altered expression in daf-2(e1370) comparing to in N2 in cell cluster RIM. fold change > 2, FDR < 0.05 WBPaper00067693:daf-2(e1370)_downregulated_RIM
  Transcripts enriched in RIM according to single cell RNAseq. Genes that pass the Bonferroni threshold for multiple comparisons (q < 0.05) are significantly enriched. WBPaper00061651:RIM_enriched

0 Expression Patterns

0 Life Stages

2 Parents

Definition Name Synonym Primary Identifier
neuron that has neural processes in the nerve ring. nerve ring neuron   WBbt:0006974
Motor neuron that controls the movement of the head and the neck. head motor neuron   WBbt:0008610