WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Anatomy Term :

Definition  Neuron class of two interneurons with cell bodies situated in the ventral ganglion behind the excretory duct. Name  AVK
Primary Identifier  WBbt:0006823
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2 Children

Definition Name Synonym Primary Identifier
Ring and ventral cord interneuron. AVKR lineage name: ABprpapapap WBbt:0003844
Ring and ventral cord interneuron. AVKL lineage name: ABplpapapap WBbt:0003845

7 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts significantly enriched in AVK neurons comparing to all cell types at L1 larva stage. edgeR, FDR < 0.001, fold change > 2. WBPaper00055565:AVK_enriched
  Transcripts enriched in AVK according to single cell RNAseq. Genes that pass the Bonferroni threshold for multiple comparisons (q < 0.05) are significantly enriched. WBPaper00061651:AVK_enriched
  Single-cell RNA-Seq cell group 87 expressed in: AVK. CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:87
  Transcripts that showed significantly altered expression in male comparing to in hermaprhodite animals in cell cluster AVK.txt. fold change > 2, FDR < 0.05 WBPaper00068349:male_downregulated_AVK.txt
  Transcripts that showed significantly altered expression in male comparing to in hermaprhodite animals in cell cluster AVK.txt. fold change > 2, FDR < 0.05 WBPaper00068349:male_upregulated_AVK.txt
  Transcripts that showed significantly altered expression in daf-2(e1370) comparing to in N2 in cell cluster AVK. fold change > 2, FDR < 0.05 WBPaper00067693:daf-2(e1370)_downregulated_AVK
  Transcripts that showed significantly altered expression in daf-2(e1370) comparing to in N2 in cell cluster AVK. fold change > 2, FDR < 0.05 WBPaper00067693:daf-2(e1370)_upregulated_AVK

0 Expression Patterns

0 Life Stages

2 Parents

Definition Name Synonym Primary Identifier
  interneuron   WBbt:0005113
neuron that has neural processes in the nerve ring. nerve ring neuron   WBbt:0006974