WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Anatomy Term :

Definition  Neuron class of four interneurons, which send processes posteriorly down the sub-lateral cords. SIBV has cell bodies, in the ventral ganglion, which send processes that run right round the nerve ring and return to the neuropile of the ventral ganglion. Name  SIB
Primary Identifier  WBbt:0005359
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4 Children

Definition Name Synonym Primary Identifier
Receives a few synapses in the ring, has a posteriorly directed process that runs sublaterally SIBVR lineage name: ABprpapaapp WBbt:0004977
Receives a few synapses in the ring, has a posteriorly directed process that runs sublaterally SIBDL lineage name: ABplppaaaaa WBbt:0004981
Receives a few synapses in the ring, has a posteriorly directed process that runs sublaterally SIBDR lineage name: ABprppaaaaa WBbt:0004979
Receives a few synapses in the ring, has a posteriorly directed process that runs sublaterally SIBVL lineage name: ABplpapaapp WBbt:0004978

6 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts enriched in SIB according to single cell RNAseq. Genes that pass the Bonferroni threshold for multiple comparisons (q < 0.05) are significantly enriched. WBPaper00061651:SIB_enriched
  Single-cell RNA-Seq cell group 46 expressed in: SIB. CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:46
  Transcripts that showed significantly altered expression in male comparing to in hermaprhodite animals in cell cluster SIB.txt. fold change > 2, FDR < 0.05 WBPaper00068349:male_upregulated_SIB.txt
  Transcripts that showed significantly altered expression in male comparing to in hermaprhodite animals in cell cluster SIB.txt. fold change > 2, FDR < 0.05 WBPaper00068349:male_downregulated_SIB.txt
  Transcripts that showed significantly altered expression in daf-2(e1370) comparing to in N2 in cell cluster SIB. fold change > 2, FDR < 0.05 WBPaper00067693:daf-2(e1370)_upregulated_SIB
  Transcripts that showed significantly altered expression in daf-2(e1370) comparing to in N2 in cell cluster SIB. fold change > 2, FDR < 0.05 WBPaper00067693:daf-2(e1370)_downregulated_SIB

0 Expression Patterns

0 Life Stages

3 Parents

Definition Name Synonym Primary Identifier
neuron that uses vesicular acetylcholine as a neurotransmitter. cholinergic neuron ACh neuron WBbt:0006840
  interneuron   WBbt:0005113
neuron that has neural processes in the nerve ring. nerve ring neuron   WBbt:0006974