WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Anatomy Term :

Definition  Neuron class of two interneurons with cell bodies situated in the lateral ganglia. Name  AVD
Primary Identifier  WBbt:0006818
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2 Children

Definition Name Synonym Primary Identifier
Ventral cord interneuron, synapses onto VA, DA, AS motorneurons; formerly called delta. AVDL lineage name: ABalaaapalr WBbt:0003866
Ventral cord interneuron, synapses onto VA, DA, AS motorneurons; formerly called delta. AVDR lineage name: ABalaaapprl WBbt:0003865

8 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts expressed in NMDA neuron, according to PAT-Seq analysis using Pnmr-1-GFP-3XFLAG mRNA tagging. Cufflinks FPKM value >=1. WBPaper00050990:NMDA-neuron_expressed
  Transcripts uniquely expressed in NMDA neuron, according to PAT-Seq analysis using Pnmr-1-GFP-3XFLAG mRNA tagging. Cufflinks FPKM value >=1. WBPaper00050990:NMDA-neuron_enriched
  Transcripts enriched in AVD according to single cell RNAseq. Genes that pass the Bonferroni threshold for multiple comparisons (q < 0.05) are significantly enriched. WBPaper00061651:AVD_enriched
  Single-cell RNA-Seq cell group 70 expressed in: AVD. CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:70
  Transcripts that showed significantly altered expression in male comparing to in hermaprhodite animals in cell cluster AVD.txt. fold change > 2, FDR < 0.05 WBPaper00068349:male_downregulated_AVD.txt
  Transcripts that showed significantly altered expression in male comparing to in hermaprhodite animals in cell cluster AVD.txt. fold change > 2, FDR < 0.05 WBPaper00068349:male_upregulated_AVD.txt
  Transcripts that showed significantly altered expression in daf-2(e1370) comparing to in N2 in cell cluster AVD. fold change > 2, FDR < 0.05 WBPaper00067693:daf-2(e1370)_downregulated_AVD
  Transcripts that showed significantly altered expression in daf-2(e1370) comparing to in N2 in cell cluster AVD. fold change > 2, FDR < 0.05 WBPaper00067693:daf-2(e1370)_upregulated_AVD

0 Expression Patterns

0 Life Stages

1 Parents

Definition Name Synonym Primary Identifier
a type of interneurons whose synaptic output represent a final common pathway to motor neurons. The synaptic activities of command interneurons lead directly to the control of locomotion. command interneuron command neuron WBbt:0007804