WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Life Stage :

Definition  The stage in which first stage larvae (L1) that hatch in the absence of food enter a state of developmental arrest. Primary Identifier  WBls:0000802
Public Name  L1 arrest Ce
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0 Anatomy Terms

2 Contained In

Remark Definition Other Name Public Name Primary Identifier
  The stage that begins right after hatching and before development proceeds after feeding. A newly hatched L1 larva contains 558 cells. newly hatched L1 larval stage Ce WBls:0000801
  A C. elegans life stage that occurs during the L1 larval life stage C. elegans life stage occurring during L1 larval stage WBls:0000818

18 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
Starvation 48 hours at L1 arrest Transcripts that showed significantly increased expression in starved N2 animals (48 hours at L1 arrest) Fold change > 2. WBPaper00064005:starvation_upregulated_N2_mRNA
  Transcripts that showed significantly increased expression in rsks-1(ok1255) animals after 4 hours of feeding of starvation-induced arrested L1, comparing to N2 animals that went through the same treatment. DESeq2, FDR < 0.05, fold change > 2. WBPaper00067518:rsks-1(ok1255)_upregulated
Feeding for 4 hours after L1 arrest. Transcripts that showed significantly increased expression after 4 hours of feeding of starvation-induced arrested L1 N2 animals, comparing to animals continue to starve. DESeq2, FDR < 0.05, fold change > 2. WBPaper00067518:food_upregulated_N2
Feeding for 4 hours after L1 arrest. Transcripts that showed significantly decreased expression after 4 hours of feeding of starvation-induced arrested L1 N2 animals, comparing to animals continue to starve. DESeq2, FDR < 0.05, fold change > 2. WBPaper00067518:food_downregulated_N2
Feeding for 4 hours after L1 arrest. Transcripts that showed significantly decreased expression after 4 hours of feeding of starvation-induced arrested L1 raga-1(ok386)animals, comparing to animals continue to starve. DESeq2, FDR < 0.05, fold change > 2. WBPaper00067518:food_downregulated_raga-1(ok386)
Feeding for 4 hours after L1 arrest. Transcripts that showed significantly decreased expression after 4 hours of feeding of starvation-induced arrested L1 rsks-1(ok1255) animals, comparing to animals continue to starve. DESeq2, FDR < 0.05, fold change > 2. WBPaper00067518:food_downregulated_rsks-1(ok1255)
  Transcripts that showed significantly increased expression in raga-1(ok386) animals after 4 hours of feeding of starvation-induced arrested L1, comparing to N2 animals that went through the same treatment. DESeq2, FDR < 0.05, fold change > 2. WBPaper00067518:raga-1(ok386)_upegulated
Feeding for 4 hours after L1 arrest. Transcripts that showed significantly increased expression after 4 hours of feeding of starvation-induced arrested L1 rsks-1(ok1255) animals, comparing to animals continue to starve. DESeq2, FDR < 0.05, fold change > 2. WBPaper00067518:food_upregulated_rsks-1(ok1255)
  Transcripts that showed significantly decreased expression in raga-1(ok386) animals after 4 hours of feeding of starvation-induced arrested L1, comparing to N2 animals that went through the same treatment. DESeq2, FDR < 0.05, fold change > 2. WBPaper00067518:raga-1(ok386)_downregulated
Starvation 48 hours at L1 arrest Proteins that showed significantly increased expression in starved aptf-1(gk794) animals (48 hours at L1 arrest) Fold change > 2. WBPaper00064005:starvation_upregulated_aptf-1(gk794)_protein
Starvation 48 hours at L1 arrest Transcripts that showed significantly decreased expression in starved N2 animals (48 hours at L1 arrest) Fold change > 2. WBPaper00064005:starvation_downregulated_N2_mRNA
Starvation 48 hours at L1 arrest Transcripts that showed significantly increased expression in starved aptf-1(gk794) animals (48 hours at L1 arrest) Fold change > 2. WBPaper00064005:starvation_upregulated_aptf-1(gk794)_mRNA
Feeding for 4 hours after L1 arrest. Transcripts that showed significantly increased expression after 4 hours of feeding of starvation-induced arrested L1 raga-1(ok386) animals, comparing to animals continue to starve. DESeq2, FDR < 0.05, fold change > 2. WBPaper00067518:food_upregulated_raga-1(ok386)
Starvation 48 hours at L1 arrest Proteins that showed significantly increased expression in starved N2 animals (48 hours at L1 arrest) Fold change > 2. WBPaper00064005:starvation_upregulated_N2_protein
  Transcripts that showed significantly decreased expression in rsks-1(ok1255) animals after 4 hours of feeding of starvation-induced arrested L1, comparing to N2 animals that went through the same treatment. DESeq2, FDR < 0.05, fold change > 2. WBPaper00067518:rsks-1(ok1255)_downregulated
Starvation 48 hours at L1 arrest Transcripts that showed significantly decreased expression in starved aptf-1(gk794) animals (48 hours at L1 arrest) Fold change > 2. WBPaper00064005:starvation_downregulated_aptf-1(gk794)_mRNA
Starvation 48 hours at L1 arrest Proteins that showed significantly decreased expression in starved N2 animals (48 hours at L1 arrest) Fold change > 2. WBPaper00064005:starvation_downregulated_N2_protein
Starvation 48 hours at L1 arrest Proteins that showed significantly decreased expression in starved aptf-1(gk794) animals (48 hours at L1 arrest) Fold change > 2. WBPaper00064005:starvation_downregulated_aptf-1(gk794)_protein

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
    Expr14239 sod-5::GFP was expressed in dauer-arrested animals  

0 Followed By

0 Preceded By

0 Sub Stages