WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Expression Pattern :

Pattern  Our transcriptional reporter lines revealed that Cel-nhr-1 is broadly expressed in multiple somatic tissues at varying intensities. We found high expression levels in the entire hypodermis and body wall musculature from head to tail, as well as in the majority of the worm's pharyngeal muscles. The latter includes pm3-5, the cells which make up most of the muscular portions of the procorpus, metacorpus, and isthmus. Relatively lower expression levels were found in the stomatal tissues (aa, ap, e1, e3, pm1, and pm2), the terminal bulb of the pharynx (pm6-8), the intestine, and some ventral aspects of the somatic gonad. Primary Identifier  Expr16549
Remark  Reporter gene fusion not specified
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10 Anatomy Terms

Definition Name Synonym Primary Identifier
A chain of very large cuboidal cells forming a wide central lumen in which food arrives from the posterior pharynx, is digested, and from which waste products proceed to the rectum. Intestinal rings form in groups of two and four cells surrounding the common lumen; thus the epithelium is only one cell deep at any point, with neighboring cells firmly secured to their neighbors by apical adherens junctions. These cells have very large nuclei and many large vacuoles, yolk granules, and other inclusions; the latter increase in number and electron density as the animal ages. intestine gut WBbt:0005772
type of cells that make up muscle layers in the pharynx. pharyngeal muscle cell   WBbt:0005451
Longitudinal bands of muscle cells surrounding animal body, with one band running in each quadrant of the body, regulated contraction and relaxation of these muscles cause locomotion. body wall musculature body muscle WBbt:0005813
Epidermal layer. hypodermis epidermis WBbt:0005733
The components of the gonad that are separate from the germline proper. In hermaphrodite, these include five tissues which are all derived from the somatic primordium : the distal tip cells, the gonadal sheath, the spermatheca, the spermatheca-uterine valve (sp-ut) and the uterus. somatic gonad somatic germline WBbt:0005785
fifth pharyngeal muscle cell layer pm5 M5 WBbt:0003737
fourth pharyngeal muscle cell layer pm4 M4 WBbt:0003739
third pharyngeal muscle cell layer pm3 M3 WBbt:0003740
the last, posterior bulb of the pharynx. terminal bulb   WBbt:0003732
Portion of the digestive tract between the oral opening and the definitely tri-radiate beginning of the esophagus (pharynx). stoma   WBbt:0008374

1 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003600 nhr-1 R09G11.2 Caenorhabditis elegans

0 Life Stages