WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Expression Pattern :

Pattern  Embryos expressed CeSKIP::gfp ubiquitously beginning at approximately the 30 cell stage. The expression of CeSKIP::gfp continues in larval development and adult animals although the level of expression varies in different tissues. The most pronounced expression is in pharyngeal cells, in head and neurons, neurons of dorsal and ventral neuronal cord, in muscle cells, and epidermal cells mostly in head and in tail, and in some seam cells. In L4 larvae and adults, egg laying muscle cells, and anal muscle cells are also strongly labeled. Primary Identifier  Expr1923
Remark  CeSKIP(skp-1) is likely part of a two-gene operon. The first gene of this operon is bir-1. RT-PCR with primers derived from bir-1 and CeSKIP in combination with SL1 and SL2 primers demonstrated that bir-1 was SL1 trans-spliced and CeSKIP was SL2 trans-spliced. Reporter gene fusion type not specified.
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7 Anatomy Terms

Definition Name Synonym Primary Identifier
Epidermal layer. hypodermis epidermis WBbt:0005733
a large process bundle that runs along the vental mid-line extending from the ventral region of the nerve ring. ventral nerve cord ventral cord WBbt:0005829
muscle associated with hermaphrodite vulva. vulval muscle   WBbt:0005821
the feeding organ, a neuro-muscular pump in the head of the animal, used to ingest food, bacteria suspended in liquid, filter them out, grind them up and transport posteriorly into the instestine. pharynx esophagus WBbt:0003681
a bundle of nerve processes that runs along the dorsal mid-line of the animal. dorsal nerve cord dorsal cord WBbt:0006750
muscle lining of the uterine wall. uterine muscle   WBbt:0005342
muscle that controls hermaphrodite rectal opening. rectal muscle anal muscle WBbt:0005803

2 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000249 bir-1 T27F2.3 Caenorhabditis elegans
WBGene00004806 skp-1 T27F2.1 Caenorhabditis elegans

6 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The stage that begins when a C.elegans individual is fully-developed and has reached maturity. adult Ce WBls:0000041
  The third stage larva. At 25 Centigrade, it ranges 32.5-40 hours after fertilization, 18.5-26 hours after hatch. L3 larva Ce WBls:0000035
  The second stage larva. At 25 Centigrade, it ranges 25.5-32.5 hours after fertilization, 11.5-18.5 hours after hatch. L2 larva Ce WBls:0000027
  The fourth stage larva. At 25 Centigrade, it ranges 40-49.5 hours after fertilization, 26-35.5 hours after hatch. L4 larva Ce WBls:0000038
  The first stage larva. At 25 Centigrade, it ranges 14-25.5 hours after fertilization, 0-11.5 hours after hatch. L1 larva Ce WBls:0000024
  The whole period of embryogenesis in the nematode Caenorhabditis elegans, from the formation of an egg until hatching. embryo Ce WBls:0000003